# Generated by roxygen2: do not edit by hand

S3method(subset,bigSNP)
export(CODE_012)
export(CODE_DOSAGE)
export(CODE_IMPUTE_PRED)
export(as_SFBM)
export(bed)
export(bed_MAF)
export(bed_autoSVD)
export(bed_clumping)
export(bed_cor)
export(bed_counts)
export(bed_cprodVec)
export(bed_ld_scores)
export(bed_pcadapt)
export(bed_prodVec)
export(bed_projectPCA)
export(bed_projectSelfPCA)
export(bed_randomSVD)
export(bed_scaleBinom)
export(bed_tcrossprodSelf)
export(coef_to_liab)
export(download_1000G)
export(download_beagle)
export(download_genetic_map)
export(download_plink)
export(download_plink2)
export(same_ref)
export(seq_log)
export(snp_MAF)
export(snp_MAX3)
export(snp_PRS)
export(snp_ancestry_summary)
export(snp_asGeneticPos)
export(snp_asGeneticPos2)
export(snp_attach)
export(snp_attachExtdata)
export(snp_autoSVD)
export(snp_beagleImpute)
export(snp_clumping)
export(snp_cor)
export(snp_fake)
export(snp_fastImpute)
export(snp_fastImputeSimple)
export(snp_fst)
export(snp_gc)
export(snp_getSampleInfos)
export(snp_grid_PRS)
export(snp_grid_clumping)
export(snp_grid_stacking)
export(snp_indLRLDR)
export(snp_lassosum2)
export(snp_ld_scores)
export(snp_ldpred2_auto)
export(snp_ldpred2_grid)
export(snp_ldpred2_inf)
export(snp_ldsc)
export(snp_ldsc2)
export(snp_ldsplit)
export(snp_manhattan)
export(snp_match)
export(snp_modifyBuild)
export(snp_pcadapt)
export(snp_plinkIBDQC)
export(snp_plinkKINGQC)
export(snp_plinkQC)
export(snp_plinkRmSamples)
export(snp_prodBGEN)
export(snp_projectSelfPCA)
export(snp_pruning)
export(snp_qq)
export(snp_readBGEN)
export(snp_readBGI)
export(snp_readBed)
export(snp_readBed2)
export(snp_save)
export(snp_scaleAlpha)
export(snp_scaleBinom)
export(snp_simuPheno)
export(snp_split)
export(snp_subset)
export(snp_thr_correct)
export(snp_writeBed)
export(sub_bed)
exportClasses(bed)
exportMethods("[")
exportMethods(dim)
exportMethods(length)
import(Matrix)
import(bigstatsr)
import(data.table)
import(foreach)
import(ggplot2)
importFrom(Rcpp,sourceCpp)
importFrom(bigassertr,assert_01)
importFrom(bigassertr,assert_args)
importFrom(bigassertr,assert_class)
importFrom(bigassertr,assert_df_with_names)
importFrom(bigassertr,assert_dir)
importFrom(bigassertr,assert_exist)
importFrom(bigassertr,assert_ext)
importFrom(bigassertr,assert_int)
importFrom(bigassertr,assert_lengths)
importFrom(bigassertr,assert_noexist)
importFrom(bigassertr,assert_nona)
importFrom(bigassertr,assert_one_int)
importFrom(bigassertr,assert_package)
importFrom(bigassertr,assert_pos)
importFrom(bigassertr,assert_sorted)
importFrom(bigassertr,assert_type)
importFrom(bigassertr,message2)
importFrom(bigassertr,printf)
importFrom(bigassertr,stop2)
importFrom(bigassertr,warning2)
importFrom(bigparallelr,assert_cores)
importFrom(bigsparser,as_SFBM)
importFrom(doRNG,`%dorng%`)
importFrom(magrittr,"%>%")
importFrom(methods,new)
importFrom(stats,cor)
importFrom(stats,setNames)
useDynLib(bigsnpr, .registration = TRUE)
