baggr-package |
baggr - a package for Bayesian meta-analysis |
baggr |
Bayesian aggregate treatment effects model |
baggr_compare |
(Run and) compare multiple baggr models |
baggr_plot |
Plotting method in baggr package |
baggr_theme_get |
Set, get, and replace themes for baggr plots |
baggr_theme_replace |
Set, get, and replace themes for baggr plots |
baggr_theme_set |
Set, get, and replace themes for baggr plots |
baggr_theme_update |
Set, get, and replace themes for baggr plots |
binary_to_individual |
Generate individual-level binary outcome data from an aggregate statistics |
cauchy |
Prior distributions in baggr |
chicks |
Chickens: impact of electromagnetic field on calcium ion efflux in chicken brains |
convert_inputs |
Convert inputs for baggr models |
data_spike |
Spike & slab example dataset |
effect_draw |
Make predictive draws from baggr model |
effect_plot |
Plot predictive draws from baggr model |
fixed_effects |
Effects of covariates on outcome in baggr models |
forest_plot |
Draw a forest plot for a baggr model |
get_order |
Separate out ordering so we can test directly |
group_effects |
Extract baggr study effects |
heterogeneity |
Pooling metrics and related statistics for baggr |
is.baggr_cv |
Check if something is a baggr_cv object |
labbe |
L'Abbe plot for binary data |
lkj |
Prior distributions in baggr |
lognormal |
Prior distributions in baggr |
loocv |
Leave one group out cross-validation for 'baggr' models |
loo_compare |
Compare LOO CV models |
microcredit |
7 studies on effect of microcredit supply |
microcredit_simplified |
Simplified version of the microcredit dataset. |
mint |
"Mean and interval" function, including other summaries, calculated for matrix (by column) or vector |
multinormal |
Prior distributions in baggr |
mutau_cor |
Correlation between mu and tau in a baggr model |
normal |
Prior distributions in baggr |
plot.baggr |
Plotting method for baggr outputs |
plot.baggr_compare |
Plot method for baggr_compare models |
plot.baggr_cv |
Plotting method for results of baggr LOO analyses |
plot_quantiles |
plot quantiles |
pooling |
Pooling metrics and related statistics for baggr |
prepare_ma |
Convert from individual to summary data in meta-analyses |
prepare_prior |
Prepare prior values for Stan models in baggr |
print.baggr |
S3 print method for objects of class 'baggr' (model fits) |
print.baggr_compare |
Print method for baggr_compare models |
print.baggr_cv |
Print baggr cv objects nicely |
print.compare_baggr_cv |
Print baggr_cv comparisons |
print_dist |
Output a distribution as a string |
priors |
Prior distributions in baggr |
random_effects |
Extract random effects from a baggr model |
schools |
8 schools example |
set_prior_val |
Add prior values to Stan input for baggr |
single_comp_plot |
Plot single comparison ggplot in 'baggr_compare' style |
student_t |
Prior distributions in baggr |
treatment_effect |
Average treatment effect in a baggr model |
uniform |
Prior distributions in baggr |
weights.baggr |
Pooling metrics and related statistics for baggr |
yusuf |
Yusuf et al: beta-blockers and heart attacks |