Bayesian Aggregate Treatment Effects


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Documentation for package ‘baggr’ version 0.7.6

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baggr-package baggr - a package for Bayesian meta-analysis
baggr Bayesian aggregate treatment effects model
baggr_compare (Run and) compare multiple baggr models
baggr_plot Plotting method in baggr package
baggr_theme_get Set, get, and replace themes for baggr plots
baggr_theme_replace Set, get, and replace themes for baggr plots
baggr_theme_set Set, get, and replace themes for baggr plots
baggr_theme_update Set, get, and replace themes for baggr plots
binary_to_individual Generate individual-level binary outcome data from an aggregate statistics
cauchy Prior distributions in baggr
chicks Chickens: impact of electromagnetic field on calcium ion efflux in chicken brains
convert_inputs Convert inputs for baggr models
data_spike Spike & slab example dataset
effect_draw Make predictive draws from baggr model
effect_plot Plot predictive draws from baggr model
fixed_effects Effects of covariates on outcome in baggr models
forest_plot Draw a forest plot for a baggr model
get_order Separate out ordering so we can test directly
group_effects Extract baggr study effects
heterogeneity Pooling metrics and related statistics for baggr
is.baggr_cv Check if something is a baggr_cv object
labbe L'Abbe plot for binary data
lkj Prior distributions in baggr
lognormal Prior distributions in baggr
loocv Leave one group out cross-validation for 'baggr' models
loo_compare Compare LOO CV models
microcredit 7 studies on effect of microcredit supply
microcredit_simplified Simplified version of the microcredit dataset.
mint "Mean and interval" function, including other summaries, calculated for matrix (by column) or vector
multinormal Prior distributions in baggr
mutau_cor Correlation between mu and tau in a baggr model
normal Prior distributions in baggr
plot.baggr Plotting method for baggr outputs
plot.baggr_compare Plot method for baggr_compare models
plot.baggr_cv Plotting method for results of baggr LOO analyses
plot_quantiles plot quantiles
pooling Pooling metrics and related statistics for baggr
prepare_ma Convert from individual to summary data in meta-analyses
prepare_prior Prepare prior values for Stan models in baggr
print.baggr S3 print method for objects of class 'baggr' (model fits)
print.baggr_compare Print method for baggr_compare models
print.baggr_cv Print baggr cv objects nicely
print.compare_baggr_cv Print baggr_cv comparisons
print_dist Output a distribution as a string
priors Prior distributions in baggr
random_effects Extract random effects from a baggr model
schools 8 schools example
set_prior_val Add prior values to Stan input for baggr
single_comp_plot Plot single comparison ggplot in 'baggr_compare' style
student_t Prior distributions in baggr
treatment_effect Average treatment effect in a baggr model
uniform Prior distributions in baggr
weights.baggr Pooling metrics and related statistics for baggr
yusuf Yusuf et al: beta-blockers and heart attacks