Data Model version 2.1.2
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Class: Segment


    Contiguous stretch of residues that enters into symmetry operation
Attributes
Link Attributes
Attribute Methods
Link Attribute Methods
Class Methods
Factory Methods
Other Methods
Appendix

Inheritance:


Details:

Parent: link symmetry to class Symmetry
Main key: chainCode, firstSeqId
Mandatory Attributes: chainCode, firstSeqId
Known Subclasses: None
Children: None
Constructor: newObj = Segment( symmetry,chainCode=value, firstSeqId=value, ... )

Attributes (in package)

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Attribute Type Multiplicity Description
chainCode Line 1..1 chainCode for chain that segment belongs to. Part of class key  
firstSeqId Int 1..1 seqId of first residue in segment. Part of class key  

Inherited Attributes (not in package): applicationDataclassNamefieldNamesinConstructorisDeletedmetaclasspackageNamepackageShortNamequalifiedName

Link Attributes (in package)

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Attribute Type Multiplicity Description
parent Symmetry 1..1 link to parent object - synonym for symmetry  
residues ccp.api.molecule.MolSystem.Residue 0..* Derived. Residues that make up segment  
symmetry Symmetry 1..1 (Parent link). parent link  

Inherited Attributes (not in package): accessactiveAccessroottopObject

Attribute Methods (in package)

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Attribute Method Return Parameters Comment
chainCode
getChainCode Line -
setChainCode - Line
firstSeqId
getFirstSeqId Int -
setFirstSeqId - Int

Link Attribute Methods (in package)

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Attribute Method Return Parameters Comment
parent
getParent Symmetry -
residues
getResidues ccp.api.molecule.MolSystem.Residue Tuple - non-std.
findFirstResidue ccp.api.molecule.MolSystem.Residue keyword=value pairs
findAllResidues ccp.api.molecule.MolSystem.Residue List keyword=value pairs
symmetry
getSymmetry Symmetry -

Class Methods (in package)

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Method Return Parameters Comment
checkValid - Boolean
checkAllValid - Boolean
getByKey Segment memops.api.Implementation.MemopsObject, Any List static
getFullKey Any List Boolean
getLocalKey Any -
get Any String
set - String, Any

Factory Methods (in package)

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Method Return Parameters
None

Other Methods (in package)

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Method Return Parameters Comment
None

Appendix

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guid:

www.ccpn.ac.uk_Fogh_2008-02-20-18:17:09_00004

isImplicit:

False

Tag

Value
repositoryId $Id: $

Tag

Value
repositoryTag $Name: $

Special constructor code:

None

Special destructor code:

None

Special postDestructor code:

None

Constraint name:

all_implied_residues_exist
Constraint code: len(self.residues) == self.symmetry.segmentLength
Known inward one-way links: None
  Data Model Version 2.1.2
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  Autogenerated by  PyApiDocGen  revision 1.3   on  Mon Mar 2 17:24:46 2015    from data model package  molsim.api.Symmetry.Segment   revision ?  
  Work done by the CCPN team.
www.ccpn.ac.uk